Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf139Q7TMV1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rnf139Q7TMV1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf139Q7TMV1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rnf139Q7TMV1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rnf139Q7TMV1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rnf139Q7TMV1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf139Q7TMV1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf139Q7TMV1 Gm15173-201ENSMUST00000122049 433 ntBASIC16.64■□□□□ 0.25
Rnf139Q7TMV1 Gm7230-201ENSMUST00000173026 815 ntBASIC16.64■□□□□ 0.25
Rnf139Q7TMV1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf139Q7TMV1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf139Q7TMV1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf139Q7TMV1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf139Q7TMV1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf139Q7TMV1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rnf139Q7TMV1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf139Q7TMV1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf139Q7TMV1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf139Q7TMV1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms