Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.65■□□□□ 0.58
Sned1Q70E20 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.65■□□□□ 0.58
Sned1Q70E20 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Sned1Q70E20 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.65■□□□□ 0.58
Sned1Q70E20 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sned1Q70E20 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sned1Q70E20 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sned1Q70E20 Shd-206ENSMUST00000225145 998 ntBASIC18.65■□□□□ 0.58
Sned1Q70E20 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sned1Q70E20 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sned1Q70E20 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sned1Q70E20 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sned1Q70E20 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Sned1Q70E20 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sned1Q70E20 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sned1Q70E20 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sned1Q70E20 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sned1Q70E20 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sned1Q70E20 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sned1Q70E20 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Sned1Q70E20 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sned1Q70E20 Gm18018-201ENSMUST00000198273 408 ntBASIC18.64■□□□□ 0.57
Sned1Q70E20 Gm9908-201ENSMUST00000211534 448 ntBASIC18.64■□□□□ 0.57
Sned1Q70E20 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.64■□□□□ 0.57
Sned1Q70E20 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sned1Q70E20 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Sned1Q70E20 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sned1Q70E20 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.63■□□□□ 0.57
Sned1Q70E20 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.63■□□□□ 0.57
Sned1Q70E20 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sned1Q70E20 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sned1Q70E20 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sned1Q70E20 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sned1Q70E20 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sned1Q70E20 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.63■□□□□ 0.57
Sned1Q70E20 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sned1Q70E20 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sned1Q70E20 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sned1Q70E20 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sned1Q70E20 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.63■□□□□ 0.57
Sned1Q70E20 Gm45668-201ENSMUST00000211271 493 ntBASIC18.63■□□□□ 0.57
Sned1Q70E20 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sned1Q70E20 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.63■□□□□ 0.57
Sned1Q70E20 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sned1Q70E20 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sned1Q70E20 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Sned1Q70E20 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sned1Q70E20 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sned1Q70E20 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sned1Q70E20 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sned1Q70E20 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sned1Q70E20 Gm5566-201ENSMUST00000116118 459 ntBASIC18.62■□□□□ 0.57
Sned1Q70E20 Gm13829-201ENSMUST00000119600 138 ntBASIC18.62■□□□□ 0.57
Sned1Q70E20 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.62■□□□□ 0.57
Sned1Q70E20 Gm6007-201ENSMUST00000208170 823 ntBASIC18.62■□□□□ 0.57
Sned1Q70E20 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sned1Q70E20 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sned1Q70E20 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.62■□□□□ 0.57
Sned1Q70E20 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sned1Q70E20 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sned1Q70E20 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sned1Q70E20 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sned1Q70E20 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.62■□□□□ 0.57
Sned1Q70E20 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sned1Q70E20 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sned1Q70E20 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.61■□□□□ 0.57
Sned1Q70E20 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.61■□□□□ 0.57
Sned1Q70E20 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Gm42612-201ENSMUST00000197986 623 ntBASIC18.61■□□□□ 0.57
Sned1Q70E20 Gm43170-201ENSMUST00000199827 612 ntBASIC18.61■□□□□ 0.57
Sned1Q70E20 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.61■□□□□ 0.57
Sned1Q70E20 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.61■□□□□ 0.57
Sned1Q70E20 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Sned1Q70E20 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sned1Q70E20 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.6■□□□□ 0.57
Sned1Q70E20 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Mir1938-201ENSMUST00000158746 100 ntBASIC18.6■□□□□ 0.57
Sned1Q70E20 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sned1Q70E20 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.6■□□□□ 0.57
Sned1Q70E20 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms