Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nup98Q6PFD9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Gm27622-201ENSMUST00000183779 60 ntBASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Gm27920-201ENSMUST00000183953 96 ntBASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nup98Q6PFD9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Nup98Q6PFD9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Nup98Q6PFD9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 AA543401-201ENSMUST00000164248 1269 ntBASIC18.2■□□□□ 0.5
Nup98Q6PFD9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nup98Q6PFD9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.19■□□□□ 0.5
Nup98Q6PFD9 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Gm18057-201ENSMUST00000208220 503 ntBASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.19■□□□□ 0.5
Nup98Q6PFD9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup98Q6PFD9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Gm15693-201ENSMUST00000120470 637 ntBASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Gm38294-201ENSMUST00000192831 381 ntBASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup98Q6PFD9 App-207ENSMUST00000227737 2827 ntBASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.18■□□□□ 0.5
Nup98Q6PFD9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Gm27321-201ENSMUST00000185021 205 ntBASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms