Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC20.18■□□□□ 0.82
Chd4Q6PDQ2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Gm42934-201ENSMUST00000196920 1345 ntBASIC20.17■□□□□ 0.82
Chd4Q6PDQ2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Chd4Q6PDQ2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Chd4Q6PDQ2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd4Q6PDQ2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd4Q6PDQ2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chd4Q6PDQ2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC20.16■□□□□ 0.82
Chd4Q6PDQ2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC20.16■□□□□ 0.82
Chd4Q6PDQ2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Chd4Q6PDQ2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chd4Q6PDQ2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chd4Q6PDQ2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Gm12017-201ENSMUST00000122453 1003 ntBASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Gm27618-201ENSMUST00000183671 60 ntBASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Gm5626-201ENSMUST00000222151 1058 ntBASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Gm14026-201ENSMUST00000120625 1789 ntBASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Gm14057-201ENSMUST00000120631 482 ntBASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd4Q6PDQ2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chd4Q6PDQ2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chd4Q6PDQ2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC20.14■□□□□ 0.82
Chd4Q6PDQ2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chd4Q6PDQ2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Chd4Q6PDQ2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Chd4Q6PDQ2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Chd4Q6PDQ2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chd4Q6PDQ2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd4Q6PDQ2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd4Q6PDQ2 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.14■□□□□ 0.81
Chd4Q6PDQ2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd4Q6PDQ2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chd4Q6PDQ2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Chd4Q6PDQ2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd4Q6PDQ2 Gm7556-201ENSMUST00000201178 1084 ntBASIC20.14■□□□□ 0.81
Chd4Q6PDQ2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC20.14■□□□□ 0.81
Chd4Q6PDQ2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Gm16026-204ENSMUST00000162652 683 ntBASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Gm5779-201ENSMUST00000218467 910 ntBASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd4Q6PDQ2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms