Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarcc2Q6PDG5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Gm9172-201ENSMUST00000212092 954 ntBASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Mzt1-203ENSMUST00000227948 952 ntBASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarcc2Q6PDG5 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm8825-201ENSMUST00000182565 998 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm4518-201ENSMUST00000182638 718 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Rps4l-201ENSMUST00000071745 943 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Smarcc2Q6PDG5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc2Q6PDG5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Smarcc2Q6PDG5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.14■□□□□ 0.49
Smarcc2Q6PDG5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms