Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.36□□□□□ -0.11
Smarcd3Q6P9Z1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Gm13836-201ENSMUST00000121159 501 ntBASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd3Q6P9Z1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd3Q6P9Z1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Smarcd3Q6P9Z1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Smarcd3Q6P9Z1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.33□□□□□ -0.11
Smarcd3Q6P9Z1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smarcd3Q6P9Z1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smarcd3Q6P9Z1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.11
Smarcd3Q6P9Z1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Gm18032-201ENSMUST00000222541 538 ntBASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd3Q6P9Z1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Mir770-201ENSMUST00000103252 94 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms