Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Abcf1Q6P542 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.49■□□□□ 0.39
Abcf1Q6P542 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.49■□□□□ 0.39
Abcf1Q6P542 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Abcf1Q6P542 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Abcf1Q6P542 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Abcf1Q6P542 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcf1Q6P542 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.47■□□□□ 0.39
Abcf1Q6P542 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Abcf1Q6P542 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.46■□□□□ 0.39
Abcf1Q6P542 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms