Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Casc4Q6P2L7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm8825-201ENSMUST00000182565 998 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm4518-201ENSMUST00000182638 718 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Casc4Q6P2L7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Gm11452-201ENSMUST00000122376 690 ntBASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Casc4Q6P2L7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Gm6257-201ENSMUST00000163864 910 ntBASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Casc4Q6P2L7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms