Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Slx4Q6P1D7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
Slx4Q6P1D7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Slx4Q6P1D7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Slx4Q6P1D7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Slx4Q6P1D7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC23.83■■□□□ 1.41
Slx4Q6P1D7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Slx4Q6P1D7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Slx4Q6P1D7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Slx4Q6P1D7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
Slx4Q6P1D7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Slx4Q6P1D7 Gm13517-201ENSMUST00000120782 1495 ntBASIC23.83■■□□□ 1.4
Slx4Q6P1D7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Slx4Q6P1D7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Slx4Q6P1D7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Slx4Q6P1D7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Gm16026-204ENSMUST00000162652 683 ntBASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Gm9794-201ENSMUST00000202370 423 ntBASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slx4Q6P1D7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Slx4Q6P1D7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Slx4Q6P1D7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Slx4Q6P1D7 Gm14767-201ENSMUST00000121559 586 ntBASIC23.81■■□□□ 1.4
Slx4Q6P1D7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC23.81■■□□□ 1.4
Slx4Q6P1D7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Slx4Q6P1D7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC23.81■■□□□ 1.4
Slx4Q6P1D7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Slx4Q6P1D7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Slx4Q6P1D7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC23.8■■□□□ 1.4
Slx4Q6P1D7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC23.8■■□□□ 1.4
Slx4Q6P1D7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Slx4Q6P1D7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Slx4Q6P1D7 AC135669.1-201ENSMUST00000213585 412 ntBASIC23.8■■□□□ 1.4
Slx4Q6P1D7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Slx4Q6P1D7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Slx4Q6P1D7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Slx4Q6P1D7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Slx4Q6P1D7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Slx4Q6P1D7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Slx4Q6P1D7 Gm7901-201ENSMUST00000120430 1597 ntBASIC23.8■■□□□ 1.4
Slx4Q6P1D7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Gm24694-201ENSMUST00000180054 110 ntBASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Gm27663-201ENSMUST00000184839 110 ntBASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Syt7-204ENSMUST00000223586 1344 ntBASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Slx4Q6P1D7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Gm3365-201ENSMUST00000216296 1480 ntBASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Gm8410-201ENSMUST00000117225 605 ntBASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Gm15483-201ENSMUST00000120338 456 ntBASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Gm15321-201ENSMUST00000121290 288 ntBASIC23.78■■□□□ 1.4
Slx4Q6P1D7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Gm27533-201ENSMUST00000183800 152 ntBASIC23.78■■□□□ 1.4
Slx4Q6P1D7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Slx4Q6P1D7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slx4Q6P1D7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slx4Q6P1D7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC23.77■■□□□ 1.4
Slx4Q6P1D7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Slx4Q6P1D7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC23.77■■□□□ 1.4
Slx4Q6P1D7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms