Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Gm8825-201ENSMUST00000182565 998 ntBASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Gm4518-201ENSMUST00000182638 718 ntBASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Gm27357-201ENSMUST00000183754 135 ntBASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.85■□□□□ 0.13
Sp140Q6NSQ5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sp140Q6NSQ5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sp140Q6NSQ5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sp140Q6NSQ5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sp140Q6NSQ5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sp140Q6NSQ5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sp140Q6NSQ5 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.83■□□□□ 0.13
Sp140Q6NSQ5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Sp140Q6NSQ5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Gm9172-201ENSMUST00000212092 954 ntBASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sp140Q6NSQ5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Gm14859-201ENSMUST00000117752 357 ntBASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms