Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
VclQ64727 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.33■□□□□ 0.04
VclQ64727 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.33■□□□□ 0.04
VclQ64727 Gm7230-201ENSMUST00000173026 815 ntBASIC15.33■□□□□ 0.04
VclQ64727 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Gm19164-201ENSMUST00000210667 640 ntBASIC15.33■□□□□ 0.04
VclQ64727 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.33■□□□□ 0.04
VclQ64727 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.33■□□□□ 0.04
VclQ64727 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.33■□□□□ 0.04
VclQ64727 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.33■□□□□ 0.04
VclQ64727 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VclQ64727 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VclQ64727 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VclQ64727 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.32■□□□□ 0.04
VclQ64727 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.32■□□□□ 0.04
VclQ64727 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
VclQ64727 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.32■□□□□ 0.04
VclQ64727 Gm11780-201ENSMUST00000136880 516 ntBASIC15.32■□□□□ 0.04
VclQ64727 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Gm6089-201ENSMUST00000197666 938 ntBASIC15.32■□□□□ 0.04
VclQ64727 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VclQ64727 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.32■□□□□ 0.04
VclQ64727 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VclQ64727 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.31■□□□□ 0.04
VclQ64727 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VclQ64727 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.31■□□□□ 0.04
VclQ64727 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Gm7222-201ENSMUST00000117512 906 ntBASIC15.31■□□□□ 0.04
VclQ64727 Gm15173-201ENSMUST00000122049 433 ntBASIC15.31■□□□□ 0.04
VclQ64727 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.31■□□□□ 0.04
VclQ64727 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.31■□□□□ 0.04
VclQ64727 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
VclQ64727 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.31■□□□□ 0.04
VclQ64727 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VclQ64727 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
VclQ64727 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
VclQ64727 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VclQ64727 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VclQ64727 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
VclQ64727 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.3■□□□□ 0.04
VclQ64727 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
VclQ64727 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VclQ64727 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VclQ64727 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VclQ64727 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VclQ64727 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.3■□□□□ 0.04
VclQ64727 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
VclQ64727 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VclQ64727 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms