Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.08□□□□□ -0.32
SspnQ62147 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Gm25016-201ENSMUST00000158399 131 ntBASIC13.08□□□□□ -0.32
SspnQ62147 Gm6345-202ENSMUST00000180900 204 ntBASIC13.08□□□□□ -0.32
SspnQ62147 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.08□□□□□ -0.32
SspnQ62147 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.08□□□□□ -0.32
SspnQ62147 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SspnQ62147 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
SspnQ62147 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SspnQ62147 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SspnQ62147 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SspnQ62147 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SspnQ62147 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.07□□□□□ -0.32
SspnQ62147 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SspnQ62147 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
SspnQ62147 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SspnQ62147 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Gm23634-201ENSMUST00000175071 91 ntBASIC13.07□□□□□ -0.32
SspnQ62147 Gm17808-201ENSMUST00000200859 894 ntBASIC13.07□□□□□ -0.32
SspnQ62147 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.07□□□□□ -0.32
SspnQ62147 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SspnQ62147 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SspnQ62147 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
SspnQ62147 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SspnQ62147 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.06□□□□□ -0.32
SspnQ62147 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.06□□□□□ -0.32
SspnQ62147 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.06□□□□□ -0.32
SspnQ62147 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.06□□□□□ -0.32
SspnQ62147 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SspnQ62147 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SspnQ62147 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SspnQ62147 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SspnQ62147 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SspnQ62147 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SspnQ62147 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.05□□□□□ -0.32
SspnQ62147 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SspnQ62147 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SspnQ62147 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SspnQ62147 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SspnQ62147 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SspnQ62147 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms