Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccne1Q61457 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC20.21■□□□□ 0.83
Ccne1Q61457 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccne1Q61457 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccne1Q61457 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccne1Q61457 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccne1Q61457 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.2■□□□□ 0.82
Ccne1Q61457 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ccne1Q61457 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ccne1Q61457 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC20.2■□□□□ 0.82
Ccne1Q61457 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Gm14057-201ENSMUST00000120631 482 ntBASIC20.2■□□□□ 0.82
Ccne1Q61457 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccne1Q61457 Rprl2-201ENSMUST00000157150 290 ntBASIC20.2■□□□□ 0.82
Ccne1Q61457 AA543401-201ENSMUST00000164248 1269 ntBASIC20.2■□□□□ 0.82
Ccne1Q61457 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccne1Q61457 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccne1Q61457 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ccne1Q61457 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ccne1Q61457 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Ccne1Q61457 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccne1Q61457 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ccne1Q61457 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccne1Q61457 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Gm14722-201ENSMUST00000118943 689 ntBASIC20.19■□□□□ 0.82
Ccne1Q61457 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC20.19■□□□□ 0.82
Ccne1Q61457 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Ccne1Q61457 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Ccne1Q61457 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccne1Q61457 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccne1Q61457 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccne1Q61457 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccne1Q61457 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccne1Q61457 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Ccne1Q61457 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccne1Q61457 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccne1Q61457 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccne1Q61457 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Ccne1Q61457 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccne1Q61457 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Gm13410-201ENSMUST00000117058 1415 ntBASIC20.18■□□□□ 0.82
Ccne1Q61457 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccne1Q61457 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccne1Q61457 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccne1Q61457 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ccne1Q61457 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccne1Q61457 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccne1Q61457 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccne1Q61457 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Ccne1Q61457 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccne1Q61457 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Ccne1Q61457 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccne1Q61457 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms