Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf9Q61179 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.38■□□□□ 0.69
Irf9Q61179 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Irf9Q61179 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf9Q61179 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Irf9Q61179 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Irf9Q61179 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Irf9Q61179 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Irf9Q61179 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Irf9Q61179 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Irf9Q61179 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.37■□□□□ 0.69
Irf9Q61179 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.37■□□□□ 0.69
Irf9Q61179 Gm14822-201ENSMUST00000122247 291 ntBASIC19.37■□□□□ 0.69
Irf9Q61179 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Irf9Q61179 Gm24513-201ENSMUST00000174964 138 ntBASIC19.37■□□□□ 0.69
Irf9Q61179 Gm2756-201ENSMUST00000195851 400 ntBASIC19.37■□□□□ 0.69
Irf9Q61179 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Irf9Q61179 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Irf9Q61179 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Irf9Q61179 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Irf9Q61179 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Irf9Q61179 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.37■□□□□ 0.69
Irf9Q61179 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.37■□□□□ 0.69
Irf9Q61179 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Irf9Q61179 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Irf9Q61179 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Irf9Q61179 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Irf9Q61179 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Irf9Q61179 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Irf9Q61179 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Irf9Q61179 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Irf9Q61179 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Irf9Q61179 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.36■□□□□ 0.69
Irf9Q61179 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.36■□□□□ 0.69
Irf9Q61179 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Irf9Q61179 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Irf9Q61179 Gm27397-201ENSMUST00000184997 107 ntBASIC19.36■□□□□ 0.69
Irf9Q61179 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.36■□□□□ 0.69
Irf9Q61179 Gm43575-201ENSMUST00000196420 516 ntBASIC19.36■□□□□ 0.69
Irf9Q61179 Gm18246-201ENSMUST00000221023 728 ntBASIC19.36■□□□□ 0.69
Irf9Q61179 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Irf9Q61179 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Irf9Q61179 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Irf9Q61179 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Irf9Q61179 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Irf9Q61179 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Irf9Q61179 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Irf9Q61179 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Irf9Q61179 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.35■□□□□ 0.69
Irf9Q61179 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Irf9Q61179 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.35■□□□□ 0.69
Irf9Q61179 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Irf9Q61179 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Irf9Q61179 Gm6736-201ENSMUST00000166583 948 ntBASIC19.35■□□□□ 0.69
Irf9Q61179 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Irf9Q61179 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Irf9Q61179 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Irf9Q61179 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Irf9Q61179 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Irf9Q61179 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Irf9Q61179 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Irf9Q61179 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Irf9Q61179 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Irf9Q61179 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.35■□□□□ 0.69
Irf9Q61179 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Irf9Q61179 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Irf9Q61179 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Irf9Q61179 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
Irf9Q61179 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Irf9Q61179 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Irf9Q61179 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Irf9Q61179 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.34■□□□□ 0.69
Irf9Q61179 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.34■□□□□ 0.69
Irf9Q61179 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.34■□□□□ 0.69
Irf9Q61179 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Irf9Q61179 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.34■□□□□ 0.69
Irf9Q61179 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.34■□□□□ 0.69
Irf9Q61179 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Irf9Q61179 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Irf9Q61179 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.34■□□□□ 0.69
Irf9Q61179 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Irf9Q61179 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Irf9Q61179 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Irf9Q61179 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Irf9Q61179 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
Irf9Q61179 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Irf9Q61179 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Irf9Q61179 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Irf9Q61179 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Irf9Q61179 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Irf9Q61179 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.33■□□□□ 0.68
Irf9Q61179 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Irf9Q61179 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Irf9Q61179 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.33■□□□□ 0.68
Irf9Q61179 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Irf9Q61179 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Irf9Q61179 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Irf9Q61179 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Irf9Q61179 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Irf9Q61179 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms