Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch1Q61115 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Ptch1Q61115 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Ptch1Q61115 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
Ptch1Q61115 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
Ptch1Q61115 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
Ptch1Q61115 Gm28631-201ENSMUST00000190740 334 ntBASIC22.24■■□□□ 1.15
Ptch1Q61115 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC22.24■■□□□ 1.15
Ptch1Q61115 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC22.24■■□□□ 1.15
Ptch1Q61115 Gm43703-201ENSMUST00000200523 763 ntBASIC22.24■■□□□ 1.15
Ptch1Q61115 AC158529.1-201ENSMUST00000223618 239 ntBASIC22.24■■□□□ 1.15
Ptch1Q61115 AC149294.4-201ENSMUST00000227870 882 ntBASIC22.24■■□□□ 1.15
Ptch1Q61115 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ptch1Q61115 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ptch1Q61115 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ptch1Q61115 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ptch1Q61115 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ptch1Q61115 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ptch1Q61115 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ptch1Q61115 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ptch1Q61115 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Ptch1Q61115 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC22.23■■□□□ 1.15
Ptch1Q61115 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC22.23■■□□□ 1.15
Ptch1Q61115 AC238811.1-201ENSMUST00000225302 441 ntBASIC22.23■■□□□ 1.15
Ptch1Q61115 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptch1Q61115 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Ptch1Q61115 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ptch1Q61115 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptch1Q61115 Gm42466-201ENSMUST00000202099 1301 ntBASIC22.23■■□□□ 1.15
Ptch1Q61115 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC22.23■■□□□ 1.15
Ptch1Q61115 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
Ptch1Q61115 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC22.23■■□□□ 1.15
Ptch1Q61115 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ptch1Q61115 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ptch1Q61115 Gm4875-201ENSMUST00000118257 786 ntBASIC22.23■■□□□ 1.15
Ptch1Q61115 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Ptch1Q61115 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptch1Q61115 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptch1Q61115 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC22.22■■□□□ 1.15
Ptch1Q61115 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Ptch1Q61115 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC22.22■■□□□ 1.15
Ptch1Q61115 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Ptch1Q61115 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ptch1Q61115 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Gm24543-201ENSMUST00000103867 82 ntBASIC22.22■■□□□ 1.15
Ptch1Q61115 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Gm9719-201ENSMUST00000162765 543 ntBASIC22.22■■□□□ 1.15
Ptch1Q61115 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC22.22■■□□□ 1.15
Ptch1Q61115 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC22.22■■□□□ 1.15
Ptch1Q61115 Shd-206ENSMUST00000225145 998 ntBASIC22.22■■□□□ 1.15
Ptch1Q61115 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch1Q61115 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ptch1Q61115 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ptch1Q61115 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
Ptch1Q61115 Gm38327-201ENSMUST00000195852 1755 ntBASIC22.21■■□□□ 1.15
Ptch1Q61115 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ptch1Q61115 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC22.21■■□□□ 1.15
Ptch1Q61115 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ptch1Q61115 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC22.21■■□□□ 1.15
Ptch1Q61115 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC22.21■■□□□ 1.15
Ptch1Q61115 Gm4204-201ENSMUST00000110798 1231 ntBASIC22.21■■□□□ 1.15
Ptch1Q61115 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC22.21■■□□□ 1.15
Ptch1Q61115 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Ptch1Q61115 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Ptch1Q61115 Gm8602-201ENSMUST00000184045 607 ntBASIC22.21■■□□□ 1.15
Ptch1Q61115 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC22.21■■□□□ 1.15
Ptch1Q61115 Gm9908-201ENSMUST00000211534 448 ntBASIC22.21■■□□□ 1.15
Ptch1Q61115 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ptch1Q61115 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ptch1Q61115 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ptch1Q61115 Gm14026-201ENSMUST00000120625 1789 ntBASIC22.21■■□□□ 1.15
Ptch1Q61115 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
Ptch1Q61115 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptch1Q61115 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.2■■□□□ 1.14
Ptch1Q61115 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC22.2■■□□□ 1.14
Ptch1Q61115 Gm37811-201ENSMUST00000192416 2601 ntBASIC22.2■■□□□ 1.14
Ptch1Q61115 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC22.2■■□□□ 1.14
Ptch1Q61115 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC22.2■■□□□ 1.14
Ptch1Q61115 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC22.2■■□□□ 1.14
Ptch1Q61115 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptch1Q61115 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptch1Q61115 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptch1Q61115 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Ptch1Q61115 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC22.2■■□□□ 1.14
Ptch1Q61115 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms