Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scaf1Q5U4C3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scaf1Q5U4C3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC20.27■□□□□ 0.84
Scaf1Q5U4C3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scaf1Q5U4C3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC20.27■□□□□ 0.84
Scaf1Q5U4C3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scaf1Q5U4C3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scaf1Q5U4C3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scaf1Q5U4C3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scaf1Q5U4C3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scaf1Q5U4C3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Scaf1Q5U4C3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scaf1Q5U4C3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 Gm10253-201ENSMUST00000194270 940 ntBASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scaf1Q5U4C3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Prob1-201ENSMUST00000097619 3021 ntBASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 AA543401-201ENSMUST00000164248 1269 ntBASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Mir7023-201ENSMUST00000185093 64 ntBASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 AC139382.1-201ENSMUST00000221402 498 ntBASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scaf1Q5U4C3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Gm7336-201ENSMUST00000107041 1232 ntBASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Fgf17-202ENSMUST00000227123 1336 ntBASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC20.24■□□□□ 0.83
Scaf1Q5U4C3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Gm6973-201ENSMUST00000117080 721 ntBASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Gm2810-201ENSMUST00000118681 990 ntBASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scaf1Q5U4C3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scaf1Q5U4C3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scaf1Q5U4C3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scaf1Q5U4C3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scaf1Q5U4C3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Scaf1Q5U4C3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC20.22■□□□□ 0.83
Scaf1Q5U4C3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scaf1Q5U4C3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Scaf1Q5U4C3 Gm27430-201ENSMUST00000184585 107 ntBASIC20.22■□□□□ 0.83
Scaf1Q5U4C3 Gm44333-201ENSMUST00000197168 107 ntBASIC20.22■□□□□ 0.83
Scaf1Q5U4C3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms