Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shroom1Q5SX79 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.58■□□□□ 0.25
Shroom1Q5SX79 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shroom1Q5SX79 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Shroom1Q5SX79 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.58■□□□□ 0.25
Shroom1Q5SX79 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Shroom1Q5SX79 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shroom1Q5SX79 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Shroom1Q5SX79 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.58■□□□□ 0.24
Shroom1Q5SX79 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Shroom1Q5SX79 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Mir8117-201ENSMUST00000184773 107 ntBASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Gm37153-201ENSMUST00000193637 231 ntBASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Gm10175-201ENSMUST00000086013 645 ntBASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shroom1Q5SX79 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Gm4995-201ENSMUST00000117247 432 ntBASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Gm24513-201ENSMUST00000174964 138 ntBASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Prob1-201ENSMUST00000097619 3021 ntBASIC16.56■□□□□ 0.24
Shroom1Q5SX79 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.55■□□□□ 0.24
Shroom1Q5SX79 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.55■□□□□ 0.24
Shroom1Q5SX79 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms