Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav2Q5R1I9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav2Q5R1I9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav2Q5R1I9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav2Q5R1I9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav2Q5R1I9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav2Q5R1I9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav2Q5R1I9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.46□□□□□ -0.42
Trav2Q5R1I9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav2Q5R1I9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav2Q5R1I9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav2Q5R1I9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav2Q5R1I9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav2Q5R1I9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Gm13036-201ENSMUST00000117799 748 ntBASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Gm11764-201ENSMUST00000120221 623 ntBASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Gm5364-201ENSMUST00000216789 889 ntBASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav2Q5R1I9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Psmb5-202ENSMUST00000227257 622 ntBASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav2Q5R1I9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Gm15358-201ENSMUST00000119249 520 ntBASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.43□□□□□ -0.42
Trav2Q5R1I9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.43□□□□□ -0.42
Trav2Q5R1I9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.43□□□□□ -0.42
Trav2Q5R1I9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms