Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Efs-202ENSMUST00000227037 2540 ntBASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Gm12896-201ENSMUST00000118430 226 ntBASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7d-4Q5R1H9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7d-4Q5R1H9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Gm18115-201ENSMUST00000221209 621 ntBASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav7d-4Q5R1H9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms