Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Gm5312-201ENSMUST00000203728 547 ntBASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf43Q5NCP0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf43Q5NCP0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.83■□□□□ 0.13
Rnf43Q5NCP0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf43Q5NCP0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf43Q5NCP0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf43Q5NCP0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf43Q5NCP0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf43Q5NCP0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf43Q5NCP0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf43Q5NCP0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rnf43Q5NCP0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf43Q5NCP0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms