Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC26.94■■□□□ 1.9
Trim41Q5NCC3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim41Q5NCC3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim41Q5NCC3 Gm9899-201ENSMUST00000065519 555 ntBASIC26.94■■□□□ 1.9
Trim41Q5NCC3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Trim41Q5NCC3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim41Q5NCC3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Trim41Q5NCC3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim41Q5NCC3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim41Q5NCC3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim41Q5NCC3 Gm13332-201ENSMUST00000120451 1398 ntBASIC26.94■■□□□ 1.9
Trim41Q5NCC3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Trim41Q5NCC3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC26.93■■□□□ 1.9
Trim41Q5NCC3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
Trim41Q5NCC3 Gm5177-201ENSMUST00000183092 997 ntBASIC26.93■■□□□ 1.9
Trim41Q5NCC3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Trim41Q5NCC3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trim41Q5NCC3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trim41Q5NCC3 Gm38327-201ENSMUST00000195852 1755 ntBASIC26.93■■□□□ 1.9
Trim41Q5NCC3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trim41Q5NCC3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trim41Q5NCC3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
Trim41Q5NCC3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trim41Q5NCC3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Trim41Q5NCC3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Trim41Q5NCC3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim41Q5NCC3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim41Q5NCC3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim41Q5NCC3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
Trim41Q5NCC3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim41Q5NCC3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Trim41Q5NCC3 Mir1938-201ENSMUST00000158746 100 ntBASIC26.92■■□□□ 1.9
Trim41Q5NCC3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC26.92■■□□□ 1.9
Trim41Q5NCC3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC26.92■■□□□ 1.9
Trim41Q5NCC3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim41Q5NCC3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC26.92■■□□□ 1.9
Trim41Q5NCC3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim41Q5NCC3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim41Q5NCC3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC26.91■■□□□ 1.9
Trim41Q5NCC3 Gm12151-201ENSMUST00000121374 290 ntBASIC26.91■■□□□ 1.9
Trim41Q5NCC3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC26.91■■□□□ 1.9
Trim41Q5NCC3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Trim41Q5NCC3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Trim41Q5NCC3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC26.91■■□□□ 1.9
Trim41Q5NCC3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim41Q5NCC3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim41Q5NCC3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim41Q5NCC3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim41Q5NCC3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim41Q5NCC3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC26.91■■□□□ 1.9
Trim41Q5NCC3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Gm44729-201ENSMUST00000206759 2052 ntBASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC26.9■■□□□ 1.9
Trim41Q5NCC3 AC140397.2-201ENSMUST00000224213 834 ntBASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Trim41Q5NCC3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim41Q5NCC3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
Trim41Q5NCC3 Gm9954-202ENSMUST00000198686 4725 ntBASIC26.89■■□□□ 1.9
Trim41Q5NCC3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim41Q5NCC3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim41Q5NCC3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim41Q5NCC3 Gm12892-201ENSMUST00000117367 1146 ntBASIC26.89■■□□□ 1.9
Trim41Q5NCC3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim41Q5NCC3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim41Q5NCC3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim41Q5NCC3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim41Q5NCC3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Trim41Q5NCC3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
Trim41Q5NCC3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Trim41Q5NCC3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Trim41Q5NCC3 Gm45412-201ENSMUST00000210217 2275 ntBASIC26.88■■□□□ 1.89
Trim41Q5NCC3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Trim41Q5NCC3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim41Q5NCC3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim41Q5NCC3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim41Q5NCC3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Trim41Q5NCC3 Gm27301-201ENSMUST00000184012 127 ntBASIC26.88■■□□□ 1.89
Trim41Q5NCC3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC26.88■■□□□ 1.89
Trim41Q5NCC3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim41Q5NCC3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Trim41Q5NCC3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim41Q5NCC3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim41Q5NCC3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms