Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.33■□□□□ 0.04
Vps13aQ5H8C4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps13aQ5H8C4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps13aQ5H8C4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Gm9824-201ENSMUST00000178707 561 ntBASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Gm42612-201ENSMUST00000197986 623 ntBASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Gm43170-201ENSMUST00000199827 612 ntBASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Gm19164-201ENSMUST00000210667 640 ntBASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Mir1247-201ENSMUST00000116706 82 ntBASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Gm14767-201ENSMUST00000121559 586 ntBASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps13aQ5H8C4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Gm27533-201ENSMUST00000183800 152 ntBASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps13aQ5H8C4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Gm45331-201ENSMUST00000209868 554 ntBASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Shd-206ENSMUST00000225145 998 ntBASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Gm8515-201ENSMUST00000194852 576 ntBASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps13aQ5H8C4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Gm15824-201ENSMUST00000119516 955 ntBASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Gm38225-201ENSMUST00000194001 393 ntBASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps13aQ5H8C4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms