Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf20Q5DTM8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Gm12644-201ENSMUST00000119935 606 ntBASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Ank2-226ENSMUST00000189368 339 ntBASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Gm21362-201ENSMUST00000194272 928 ntBASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Gm18622-201ENSMUST00000219361 595 ntBASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf20Q5DTM8 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Gm19164-201ENSMUST00000210667 640 ntBASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Gm8655-201ENSMUST00000221159 852 ntBASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf20Q5DTM8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Gm8344-201ENSMUST00000119813 856 ntBASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf20Q5DTM8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf20Q5DTM8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms