Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Mir3113-201ENSMUST00000175478 76 ntBASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Gm17968-201ENSMUST00000194902 784 ntBASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rc3h1Q4VGL6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Gm27702-201ENSMUST00000184512 56 ntBASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Gm2213-201ENSMUST00000197485 688 ntBASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rc3h1Q4VGL6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rc3h1Q4VGL6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Gm43575-201ENSMUST00000196420 516 ntBASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rc3h1Q4VGL6 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.96■□□□□ 0.46
Rc3h1Q4VGL6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rc3h1Q4VGL6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms