Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Mir7023-201ENSMUST00000185093 64 ntBASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx49Q4FZF3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Gm43474-201ENSMUST00000196415 774 ntBASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx49Q4FZF3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Mir6990-201ENSMUST00000183724 91 ntBASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Gm19164-201ENSMUST00000210667 640 ntBASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Ddx49Q4FZF3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx49Q4FZF3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx49Q4FZF3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Ddx49Q4FZF3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.08■□□□□ 0.48
Ddx49Q4FZF3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx49Q4FZF3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.08■□□□□ 0.48
Ddx49Q4FZF3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Ddx49Q4FZF3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx49Q4FZF3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx49Q4FZF3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
Ddx49Q4FZF3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms