Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm14722-201ENSMUST00000118943 689 ntBASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Gm25911-201ENSMUST00000157621 56 ntBASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Prpf38aQ4FK66 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 Gm6736-201ENSMUST00000166583 948 ntBASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.17■□□□□ 0.5
Prpf38aQ4FK66 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Gm24513-201ENSMUST00000174964 138 ntBASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Gm27397-201ENSMUST00000184997 107 ntBASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf38aQ4FK66 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.15■□□□□ 0.5
Prpf38aQ4FK66 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Prpf38aQ4FK66 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.14■□□□□ 0.49
Prpf38aQ4FK66 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms