Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Gm27989-201ENSMUST00000184721 107 ntBASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Gm44344-201ENSMUST00000200287 129 ntBASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Shank3Q4ACU6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shank3Q4ACU6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shank3Q4ACU6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.19■□□□□ 0.66
Shank3Q4ACU6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shank3Q4ACU6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
Shank3Q4ACU6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Shank3Q4ACU6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shank3Q4ACU6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.19■□□□□ 0.66
Shank3Q4ACU6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shank3Q4ACU6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Gm22189-201ENSMUST00000103822 86 ntBASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Gm15321-201ENSMUST00000121290 288 ntBASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Gm18049-201ENSMUST00000208909 581 ntBASIC19.18■□□□□ 0.66
Shank3Q4ACU6 AC135669.1-201ENSMUST00000213585 412 ntBASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shank3Q4ACU6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Gm38225-201ENSMUST00000194001 393 ntBASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Syt7-205ENSMUST00000224135 1557 ntBASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Gm43703-201ENSMUST00000200523 763 ntBASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Gm9794-201ENSMUST00000202370 423 ntBASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Shank3Q4ACU6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shank3Q4ACU6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Gm45059-201ENSMUST00000205558 1077 ntBASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Rassf8-202ENSMUST00000058538 1131 ntBASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shank3Q4ACU6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms