Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc27Q3V036 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc27Q3V036 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Mir770-201ENSMUST00000103252 94 ntBASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Gm9013-201ENSMUST00000132939 882 ntBASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc27Q3V036 Gm9768-201ENSMUST00000206007 2861 ntBASIC19.89■□□□□ 0.78
Ccdc27Q3V036 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Ccdc27Q3V036 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ccdc27Q3V036 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc27Q3V036 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
Ccdc27Q3V036 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc27Q3V036 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc27Q3V036 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc27Q3V036 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc27Q3V036 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc27Q3V036 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc27Q3V036 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc27Q3V036 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc27Q3V036 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccdc27Q3V036 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc27Q3V036 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc27Q3V036 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Gm10052-201ENSMUST00000168019 960 ntBASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Gm44430-201ENSMUST00000203376 995 ntBASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Gm7729-201ENSMUST00000050143 801 ntBASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.88■□□□□ 0.77
Ccdc27Q3V036 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc27Q3V036 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc27Q3V036 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc27Q3V036 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc27Q3V036 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc27Q3V036 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc27Q3V036 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms