Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Asic1-205ENSMUST00000228185 1818 ntBASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdkl5Q3UTQ8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Gm8097-201ENSMUST00000117903 829 ntBASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Gm9103-201ENSMUST00000119371 405 ntBASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cdkl5Q3UTQ8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdkl5Q3UTQ8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdkl5Q3UTQ8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdkl5Q3UTQ8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms