Protein–RNA interactions for Protein: Q3UH53

Sdk1, Protein sidekick-1, mousemouse

Predictions only

Length 2,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdk1Q3UH53 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sdk1Q3UH53 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sdk1Q3UH53 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sdk1Q3UH53 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sdk1Q3UH53 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Mir8102-201ENSMUST00000184148 139 ntBASIC13.18□□□□□ -0.3
Sdk1Q3UH53 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Gm44855-201ENSMUST00000205725 362 ntBASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdk1Q3UH53 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Gm7488-201ENSMUST00000117148 684 ntBASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Gm14719-201ENSMUST00000121891 340 ntBASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Mir7684-201ENSMUST00000183858 60 ntBASIC13.17□□□□□ -0.3
Sdk1Q3UH53 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Sdk1Q3UH53 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.16□□□□□ -0.3
Sdk1Q3UH53 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.16□□□□□ -0.3
Sdk1Q3UH53 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdk1Q3UH53 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms