Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Puf60Q3UEB3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Puf60Q3UEB3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Puf60Q3UEB3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC21.33■■□□□ 1.01
Puf60Q3UEB3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Puf60Q3UEB3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Puf60Q3UEB3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC21.33■■□□□ 1
Puf60Q3UEB3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Puf60Q3UEB3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Puf60Q3UEB3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Puf60Q3UEB3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Puf60Q3UEB3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
Puf60Q3UEB3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC21.33■■□□□ 1
Puf60Q3UEB3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Puf60Q3UEB3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Puf60Q3UEB3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Puf60Q3UEB3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC21.32■■□□□ 1
Puf60Q3UEB3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC21.32■■□□□ 1
Puf60Q3UEB3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Puf60Q3UEB3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Puf60Q3UEB3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Puf60Q3UEB3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC21.32■■□□□ 1
Puf60Q3UEB3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC21.32■■□□□ 1
Puf60Q3UEB3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC21.32■■□□□ 1
Puf60Q3UEB3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC21.32■■□□□ 1
Puf60Q3UEB3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC21.32■■□□□ 1
Puf60Q3UEB3 Gm43125-201ENSMUST00000201724 730 ntBASIC21.32■■□□□ 1
Puf60Q3UEB3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Puf60Q3UEB3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Puf60Q3UEB3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Puf60Q3UEB3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Puf60Q3UEB3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Puf60Q3UEB3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Puf60Q3UEB3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC21.32■■□□□ 1
Puf60Q3UEB3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Puf60Q3UEB3 Nudt18-203ENSMUST00000228768 1578 ntBASIC21.31■■□□□ 1
Puf60Q3UEB3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Puf60Q3UEB3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Puf60Q3UEB3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC21.31■■□□□ 1
Puf60Q3UEB3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Puf60Q3UEB3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC21.31■■□□□ 1
Puf60Q3UEB3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Puf60Q3UEB3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Puf60Q3UEB3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Puf60Q3UEB3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC21.31■■□□□ 1
Puf60Q3UEB3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Puf60Q3UEB3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Puf60Q3UEB3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC21.31■■□□□ 1
Puf60Q3UEB3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Puf60Q3UEB3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Puf60Q3UEB3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC21.31■■□□□ 1
Puf60Q3UEB3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC21.3■■□□□ 1
Puf60Q3UEB3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Puf60Q3UEB3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Puf60Q3UEB3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Puf60Q3UEB3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Puf60Q3UEB3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC21.3■■□□□ 1
Puf60Q3UEB3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Puf60Q3UEB3 AA543401-201ENSMUST00000164248 1269 ntBASIC21.3■■□□□ 1
Puf60Q3UEB3 Gm7063-201ENSMUST00000186840 981 ntBASIC21.3■■□□□ 1
Puf60Q3UEB3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC21.3■■□□□ 1
Puf60Q3UEB3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Puf60Q3UEB3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC21.3■■□□□ 1
Puf60Q3UEB3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Puf60Q3UEB3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Puf60Q3UEB3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC21.29■■□□□ 1
Puf60Q3UEB3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Puf60Q3UEB3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Puf60Q3UEB3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Puf60Q3UEB3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC21.29■■□□□ 1
Puf60Q3UEB3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Puf60Q3UEB3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC21.29■■□□□ 1
Puf60Q3UEB3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Puf60Q3UEB3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Puf60Q3UEB3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Puf60Q3UEB3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC21.29■■□□□ 1
Puf60Q3UEB3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC21.29■■□□□ 1
Puf60Q3UEB3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC21.29■■□□□ 1
Puf60Q3UEB3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC21.29■■□□□ 1
Puf60Q3UEB3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Puf60Q3UEB3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC21.29■■□□□ 1
Puf60Q3UEB3 Gm10154-201ENSMUST00000084445 354 ntBASIC21.29■■□□□ 1
Puf60Q3UEB3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC21.29■■□□□ 1
Puf60Q3UEB3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.29■■□□□ 1
Puf60Q3UEB3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Puf60Q3UEB3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Puf60Q3UEB3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Puf60Q3UEB3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Puf60Q3UEB3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Puf60Q3UEB3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Puf60Q3UEB3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Puf60Q3UEB3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC21.28■■□□□ 1
Puf60Q3UEB3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC21.28■■□□□ 1
Puf60Q3UEB3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC21.28■■□□□ 1
Puf60Q3UEB3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC21.28■■□□□ 1
Puf60Q3UEB3 Gm25948-201ENSMUST00000175334 112 ntBASIC21.28■■□□□ 1
Puf60Q3UEB3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC21.28■■□□□ 1
Puf60Q3UEB3 AC140397.2-201ENSMUST00000224213 834 ntBASIC21.28■■□□□ 1
Puf60Q3UEB3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC21.28■■□□□ 1
Puf60Q3UEB3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms