Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Lins1Q3U1D0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lins1Q3U1D0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Lins1Q3U1D0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lins1Q3U1D0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lins1Q3U1D0 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lins1Q3U1D0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Gm19164-201ENSMUST00000210667 640 ntBASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Lins1Q3U1D0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lins1Q3U1D0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms