Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 AA414768-201ENSMUST00000121924 1257 ntBASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.56■□□□□ 0.24
Trim43aQ3TL54 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim43aQ3TL54 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim43aQ3TL54 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Gm37722-201ENSMUST00000193757 208 ntBASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim43aQ3TL54 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms