Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ush2AQ2QI47 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Gm8099-201ENSMUST00000200510 742 ntBASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Gm18556-201ENSMUST00000219748 1031 ntBASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Rps4l-202ENSMUST00000204242 789 ntBASIC8.2□□□□□ -1.1
Ush2AQ2QI47 CT573034.1-201ENSMUST00000222983 313 ntBASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Gm5370-201ENSMUST00000187187 574 ntBASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Gm2495-201ENSMUST00000191160 466 ntBASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Gm17794-201ENSMUST00000220252 955 ntBASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ush2AQ2QI47 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Gm8805-201ENSMUST00000117848 313 ntBASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Gm19309-201ENSMUST00000218295 205 ntBASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Gm8566-201ENSMUST00000120174 465 ntBASIC8.19□□□□□ -1.1
Ush2AQ2QI47 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Gm13233-201ENSMUST00000118760 1443 ntBASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Gm13244-201ENSMUST00000118855 1446 ntBASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Gm43118-201ENSMUST00000199149 775 ntBASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Gm6407-201ENSMUST00000176468 549 ntBASIC8.19□□□□□ -1.1
Ush2AQ2QI47 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Ush2AQ2QI47 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Gm27847-201ENSMUST00000183711 107 ntBASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Gm27375-201ENSMUST00000183799 107 ntBASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Gm11628-201ENSMUST00000117568 171 ntBASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ush2AQ2QI47 Ighv1-62-201ENSMUST00000193406 350 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms