Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
Col17a1Q07563 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col17a1Q07563 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col17a1Q07563 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col17a1Q07563 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col17a1Q07563 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Col17a1Q07563 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Col17a1Q07563 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col17a1Q07563 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Col17a1Q07563 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Col17a1Q07563 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col17a1Q07563 Gm13233-201ENSMUST00000118760 1443 ntBASIC23.75■■□□□ 1.39
Col17a1Q07563 Gm13244-201ENSMUST00000118855 1446 ntBASIC23.75■■□□□ 1.39
Col17a1Q07563 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col17a1Q07563 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Col17a1Q07563 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col17a1Q07563 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Col17a1Q07563 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col17a1Q07563 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col17a1Q07563 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col17a1Q07563 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Col17a1Q07563 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC23.75■■□□□ 1.39
Col17a1Q07563 Gm7584-201ENSMUST00000175829 940 ntBASIC23.75■■□□□ 1.39
Col17a1Q07563 Mir8109-201ENSMUST00000184375 117 ntBASIC23.75■■□□□ 1.39
Col17a1Q07563 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Col17a1Q07563 Gm18054-201ENSMUST00000207539 555 ntBASIC23.75■■□□□ 1.39
Col17a1Q07563 AC132317.1-201ENSMUST00000227227 962 ntBASIC23.75■■□□□ 1.39
Col17a1Q07563 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col17a1Q07563 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col17a1Q07563 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC23.74■■□□□ 1.39
Col17a1Q07563 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col17a1Q07563 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC23.74■■□□□ 1.39
Col17a1Q07563 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
Col17a1Q07563 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Col17a1Q07563 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Col17a1Q07563 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Col17a1Q07563 Gm13350-201ENSMUST00000120519 479 ntBASIC23.74■■□□□ 1.39
Col17a1Q07563 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Col17a1Q07563 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC23.74■■□□□ 1.39
Col17a1Q07563 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC23.74■■□□□ 1.39
Col17a1Q07563 AC154276.1-201ENSMUST00000228874 1299 ntBASIC23.74■■□□□ 1.39
Col17a1Q07563 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC23.74■■□□□ 1.39
Col17a1Q07563 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col17a1Q07563 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col17a1Q07563 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col17a1Q07563 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC23.73■■□□□ 1.39
Col17a1Q07563 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col17a1Q07563 Gm8801-201ENSMUST00000173255 1064 ntBASIC23.73■■□□□ 1.39
Col17a1Q07563 Gm38230-201ENSMUST00000193572 1159 ntBASIC23.73■■□□□ 1.39
Col17a1Q07563 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Col17a1Q07563 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC23.73■■□□□ 1.39
Col17a1Q07563 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col17a1Q07563 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col17a1Q07563 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col17a1Q07563 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col17a1Q07563 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Col17a1Q07563 Gm12341-201ENSMUST00000119724 503 ntBASIC23.72■■□□□ 1.39
Col17a1Q07563 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC23.72■■□□□ 1.39
Col17a1Q07563 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
Col17a1Q07563 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC23.72■■□□□ 1.39
Col17a1Q07563 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Col17a1Q07563 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col17a1Q07563 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col17a1Q07563 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col17a1Q07563 Gm7593-201ENSMUST00000187246 644 ntBASIC23.71■■□□□ 1.39
Col17a1Q07563 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC23.71■■□□□ 1.39
Col17a1Q07563 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col17a1Q07563 Gm16499-203ENSMUST00000204633 2177 ntBASIC23.71■■□□□ 1.39
Col17a1Q07563 Gm5912-201ENSMUST00000122282 1438 ntBASIC23.71■■□□□ 1.39
Col17a1Q07563 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Col17a1Q07563 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col17a1Q07563 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col17a1Q07563 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col17a1Q07563 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Col17a1Q07563 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Col17a1Q07563 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC23.7■■□□□ 1.38
Col17a1Q07563 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col17a1Q07563 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC23.69■■□□□ 1.38
Col17a1Q07563 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC23.69■■□□□ 1.38
Col17a1Q07563 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 Mir7654-201ENSMUST00000185082 70 ntBASIC23.69■■□□□ 1.38
Col17a1Q07563 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
Col17a1Q07563 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
Col17a1Q07563 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC23.69■■□□□ 1.38
Col17a1Q07563 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col17a1Q07563 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms