Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smn1P97801 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smn1P97801 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.41□□□□□ -0.26
Smn1P97801 Gm13436-201ENSMUST00000120418 567 ntBASIC13.41□□□□□ -0.26
Smn1P97801 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.41□□□□□ -0.26
Smn1P97801 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smn1P97801 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smn1P97801 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smn1P97801 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smn1P97801 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smn1P97801 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smn1P97801 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smn1P97801 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.41□□□□□ -0.26
Smn1P97801 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smn1P97801 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Smn1P97801 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smn1P97801 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Smn1P97801 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smn1P97801 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smn1P97801 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Smn1P97801 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.4□□□□□ -0.26
Smn1P97801 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.4□□□□□ -0.26
Smn1P97801 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Smn1P97801 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Smn1P97801 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.4□□□□□ -0.26
Smn1P97801 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Mir1668-201ENSMUST00000184114 107 ntBASIC13.4□□□□□ -0.26
Smn1P97801 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.4□□□□□ -0.26
Smn1P97801 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smn1P97801 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.4□□□□□ -0.26
Smn1P97801 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smn1P97801 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smn1P97801 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smn1P97801 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Smn1P97801 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.39□□□□□ -0.27
Smn1P97801 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.39□□□□□ -0.27
Smn1P97801 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smn1P97801 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.39□□□□□ -0.27
Smn1P97801 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.39□□□□□ -0.27
Smn1P97801 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.39□□□□□ -0.27
Smn1P97801 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smn1P97801 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Smn1P97801 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Smn1P97801 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Smn1P97801 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smn1P97801 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Smn1P97801 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.38□□□□□ -0.27
Smn1P97801 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
Smn1P97801 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smn1P97801 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smn1P97801 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms