Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.72□□□□□ -0.05
Nkx3-2P97503 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Nkx3-2P97503 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.72□□□□□ -0.05
Nkx3-2P97503 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Gm7222-201ENSMUST00000117512 906 ntBASIC14.72□□□□□ -0.05
Nkx3-2P97503 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Gm6550-201ENSMUST00000187574 993 ntBASIC14.72□□□□□ -0.05
Nkx3-2P97503 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.72□□□□□ -0.05
Nkx3-2P97503 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.72□□□□□ -0.05
Nkx3-2P97503 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Nkx3-2P97503 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.71□□□□□ -0.05
Nkx3-2P97503 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkx3-2P97503 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx3-2P97503 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx3-2P97503 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx3-2P97503 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx3-2P97503 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Nkx3-2P97503 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx3-2P97503 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Nkx3-2P97503 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nkx3-2P97503 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Nkx3-2P97503 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.71□□□□□ -0.06
Nkx3-2P97503 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm8825-201ENSMUST00000182565 998 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm4518-201ENSMUST00000182638 718 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm27525-201ENSMUST00000184465 107 ntBASIC14.7□□□□□ -0.06
Nkx3-2P97503 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Nkx3-2P97503 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms