Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.12□□□□□ -0.31
Npas1P97459 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.12□□□□□ -0.31
Npas1P97459 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.12□□□□□ -0.31
Npas1P97459 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.12□□□□□ -0.31
Npas1P97459 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.12□□□□□ -0.31
Npas1P97459 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.12□□□□□ -0.31
Npas1P97459 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 BC037039-201ENSMUST00000192003 2205 ntBASIC13.12□□□□□ -0.31
Npas1P97459 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Npas1P97459 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.12□□□□□ -0.31
Npas1P97459 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Npas1P97459 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Npas1P97459 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.11□□□□□ -0.31
Npas1P97459 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Npas1P97459 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Npas1P97459 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Gm13186-201ENSMUST00000118031 316 ntBASIC13.11□□□□□ -0.31
Npas1P97459 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.11□□□□□ -0.31
Npas1P97459 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.11□□□□□ -0.31
Npas1P97459 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.11□□□□□ -0.31
Npas1P97459 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.11□□□□□ -0.31
Npas1P97459 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.11□□□□□ -0.31
Npas1P97459 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.11□□□□□ -0.31
Npas1P97459 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.11□□□□□ -0.31
Npas1P97459 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Npas1P97459 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Npas1P97459 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Npas1P97459 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Npas1P97459 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Npas1P97459 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Npas1P97459 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Npas1P97459 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.1□□□□□ -0.31
Npas1P97459 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.1□□□□□ -0.31
Npas1P97459 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.1□□□□□ -0.31
Npas1P97459 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Npas1P97459 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.1□□□□□ -0.31
Npas1P97459 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.1□□□□□ -0.31
Npas1P97459 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Npas1P97459 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Npas1P97459 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Npas1P97459 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms