Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Cacna1aP97445 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cacna1aP97445 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cacna1aP97445 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cacna1aP97445 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cacna1aP97445 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.35□□□□□ -0.11
Cacna1aP97445 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.35□□□□□ -0.11
Cacna1aP97445 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cacna1aP97445 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.35□□□□□ -0.11
Cacna1aP97445 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cacna1aP97445 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.35□□□□□ -0.11
Cacna1aP97445 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Cacna1aP97445 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacna1aP97445 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.35□□□□□ -0.11
Cacna1aP97445 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.34□□□□□ -0.11
Cacna1aP97445 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.34□□□□□ -0.11
Cacna1aP97445 Gm18889-201ENSMUST00000174284 929 ntBASIC14.34□□□□□ -0.11
Cacna1aP97445 Gm25948-201ENSMUST00000175334 112 ntBASIC14.34□□□□□ -0.11
Cacna1aP97445 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cacna1aP97445 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.34□□□□□ -0.11
Cacna1aP97445 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cacna1aP97445 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.34□□□□□ -0.11
Cacna1aP97445 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.34□□□□□ -0.11
Cacna1aP97445 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.34□□□□□ -0.11
Cacna1aP97445 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cacna1aP97445 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.34□□□□□ -0.11
Cacna1aP97445 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.34□□□□□ -0.11
Cacna1aP97445 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.34□□□□□ -0.11
Cacna1aP97445 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cacna1aP97445 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cacna1aP97445 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.34□□□□□ -0.11
Cacna1aP97445 Gm22175-201ENSMUST00000175007 78 ntBASIC14.34□□□□□ -0.11
Cacna1aP97445 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.34□□□□□ -0.11
Cacna1aP97445 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cacna1aP97445 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cacna1aP97445 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacna1aP97445 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cacna1aP97445 Gm25287-201ENSMUST00000103846 110 ntBASIC14.33□□□□□ -0.11
Cacna1aP97445 Gm22918-201ENSMUST00000103855 110 ntBASIC14.33□□□□□ -0.11
Cacna1aP97445 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.33□□□□□ -0.11
Cacna1aP97445 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cacna1aP97445 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cacna1aP97445 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cacna1aP97445 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cacna1aP97445 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.33□□□□□ -0.12
Cacna1aP97445 Rpph1-201ENSMUST00000175096 319 ntBASIC14.33□□□□□ -0.12
Cacna1aP97445 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.33□□□□□ -0.12
Cacna1aP97445 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.33□□□□□ -0.12
Cacna1aP97445 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Cacna1aP97445 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacna1aP97445 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms