Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lig3P97386 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lig3P97386 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Lig3P97386 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lig3P97386 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Lig3P97386 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lig3P97386 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lig3P97386 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lig3P97386 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Lig3P97386 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lig3P97386 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Lig3P97386 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lig3P97386 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.01■□□□□ 0.31
Lig3P97386 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Lig3P97386 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.01■□□□□ 0.31
Lig3P97386 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Lig3P97386 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Lig3P97386 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.01■□□□□ 0.31
Lig3P97386 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.01■□□□□ 0.31
Lig3P97386 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.01■□□□□ 0.31
Lig3P97386 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.01■□□□□ 0.31
Lig3P97386 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.01■□□□□ 0.31
Lig3P97386 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 Gm15590-201ENSMUST00000078419 552 ntBASIC17.01■□□□□ 0.31
Lig3P97386 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Lig3P97386 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Lig3P97386 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Lig3P97386 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lig3P97386 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Lig3P97386 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lig3P97386 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Lig3P97386 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Lig3P97386 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Lig3P97386 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lig3P97386 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lig3P97386 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Lig3P97386 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lig3P97386 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Lig3P97386 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lig3P97386 Gm14140-201ENSMUST00000119999 995 ntBASIC17■□□□□ 0.31
Lig3P97386 Gm15173-201ENSMUST00000122049 433 ntBASIC17■□□□□ 0.31
Lig3P97386 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17■□□□□ 0.31
Lig3P97386 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17■□□□□ 0.31
Lig3P97386 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lig3P97386 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lig3P97386 Gm43935-201ENSMUST00000203569 1050 ntBASIC17■□□□□ 0.31
Lig3P97386 Gm18421-201ENSMUST00000204122 625 ntBASIC17■□□□□ 0.31
Lig3P97386 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17■□□□□ 0.31
Lig3P97386 CT009713.7-201ENSMUST00000224689 571 ntBASIC17■□□□□ 0.31
Lig3P97386 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Lig3P97386 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Lig3P97386 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Lig3P97386 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lig3P97386 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17■□□□□ 0.31
Lig3P97386 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.99■□□□□ 0.31
Lig3P97386 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lig3P97386 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lig3P97386 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Lig3P97386 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.99■□□□□ 0.31
Lig3P97386 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lig3P97386 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Lig3P97386 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lig3P97386 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lig3P97386 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lig3P97386 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lig3P97386 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lig3P97386 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lig3P97386 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lig3P97386 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Lig3P97386 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lig3P97386 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lig3P97386 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lig3P97386 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lig3P97386 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lig3P97386 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lig3P97386 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lig3P97386 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lig3P97386 Gm13418-201ENSMUST00000119097 944 ntBASIC16.98■□□□□ 0.31
Lig3P97386 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lig3P97386 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Lig3P97386 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lig3P97386 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lig3P97386 Gm9727-201ENSMUST00000161387 555 ntBASIC16.98■□□□□ 0.31
Lig3P97386 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.98■□□□□ 0.31
Lig3P97386 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Lig3P97386 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Lig3P97386 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
Lig3P97386 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms