Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Gm9172-201ENSMUST00000212092 954 ntBASIC13.73□□□□□ -0.21
Hist1h3bP84228 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.73□□□□□ -0.21
Hist1h3bP84228 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.73□□□□□ -0.21
Hist1h3bP84228 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hist1h3bP84228 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.72□□□□□ -0.21
Hist1h3bP84228 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hist1h3bP84228 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.71□□□□□ -0.21
Hist1h3bP84228 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 App-207ENSMUST00000227737 2827 ntBASIC13.71□□□□□ -0.21
Hist1h3bP84228 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Gm15165-201ENSMUST00000118140 502 ntBASIC13.71□□□□□ -0.21
Hist1h3bP84228 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.71□□□□□ -0.21
Hist1h3bP84228 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.71□□□□□ -0.21
Hist1h3bP84228 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.71□□□□□ -0.21
Hist1h3bP84228 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hist1h3bP84228 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hist1h3bP84228 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hist1h3bP84228 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Hist1h3bP84228 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms