Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atf1P81269 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Atf1P81269 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atf1P81269 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atf1P81269 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Atf1P81269 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atf1P81269 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Atf1P81269 Olfr129-201ENSMUST00000122318 993 ntBASIC13.52□□□□□ -0.25
Atf1P81269 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.52□□□□□ -0.25
Atf1P81269 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Atf1P81269 Mir3081-201ENSMUST00000175305 84 ntBASIC13.52□□□□□ -0.25
Atf1P81269 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Atf1P81269 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.52□□□□□ -0.25
Atf1P81269 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.52□□□□□ -0.25
Atf1P81269 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Atf1P81269 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Atf1P81269 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Atf1P81269 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atf1P81269 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Atf1P81269 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Atf1P81269 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Atf1P81269 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.51□□□□□ -0.25
Atf1P81269 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.51□□□□□ -0.25
Atf1P81269 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.51□□□□□ -0.25
Atf1P81269 Gm27742-201ENSMUST00000184667 60 ntBASIC13.51□□□□□ -0.25
Atf1P81269 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.51□□□□□ -0.25
Atf1P81269 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.51□□□□□ -0.25
Atf1P81269 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Atf1P81269 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.51□□□□□ -0.25
Atf1P81269 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atf1P81269 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Atf1P81269 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Atf1P81269 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Atf1P81269 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.5□□□□□ -0.25
Atf1P81269 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Gm44454-201ENSMUST00000198541 138 ntBASIC13.5□□□□□ -0.25
Atf1P81269 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.5□□□□□ -0.25
Atf1P81269 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Atf1P81269 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.5□□□□□ -0.25
Atf1P81269 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Atf1P81269 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf1P81269 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf1P81269 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf1P81269 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf1P81269 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf1P81269 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Atf1P81269 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms