Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Pdlim4P70271 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pdlim4P70271 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.98□□□□□ -0.33
Pdlim4P70271 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pdlim4P70271 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.98□□□□□ -0.33
Pdlim4P70271 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Gm24589-201ENSMUST00000116692 94 ntBASIC12.98□□□□□ -0.33
Pdlim4P70271 Gm7153-201ENSMUST00000117092 455 ntBASIC12.98□□□□□ -0.33
Pdlim4P70271 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.98□□□□□ -0.33
Pdlim4P70271 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pdlim4P70271 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.98□□□□□ -0.33
Pdlim4P70271 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.98□□□□□ -0.33
Pdlim4P70271 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.98□□□□□ -0.33
Pdlim4P70271 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.98□□□□□ -0.33
Pdlim4P70271 Gm43347-201ENSMUST00000200226 580 ntBASIC12.98□□□□□ -0.33
Pdlim4P70271 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.98□□□□□ -0.33
Pdlim4P70271 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.98□□□□□ -0.33
Pdlim4P70271 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.97□□□□□ -0.33
Pdlim4P70271 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.97□□□□□ -0.33
Pdlim4P70271 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.97□□□□□ -0.33
Pdlim4P70271 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Pdlim4P70271 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.97□□□□□ -0.33
Pdlim4P70271 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.97□□□□□ -0.33
Pdlim4P70271 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.97□□□□□ -0.33
Pdlim4P70271 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Pdlim4P70271 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Pdlim4P70271 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pdlim4P70271 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.96□□□□□ -0.33
Pdlim4P70271 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Pdlim4P70271 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.96□□□□□ -0.33
Pdlim4P70271 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Pdlim4P70271 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pdlim4P70271 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pdlim4P70271 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Pdlim4P70271 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Birc2-201ENSMUST00000054878 378 ntBASIC12.96□□□□□ -0.33
Pdlim4P70271 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pdlim4P70271 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pdlim4P70271 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim4P70271 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim4P70271 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms