Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Sybu-209ENSMUST00000228639 4113 ntBASIC17.16■□□□□ 0.34
Hmgb1P63158 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hmgb1P63158 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Mir3081-201ENSMUST00000175305 84 ntBASIC17.16■□□□□ 0.34
Hmgb1P63158 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.16■□□□□ 0.34
Hmgb1P63158 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hmgb1P63158 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hmgb1P63158 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Hmgb1P63158 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmgb1P63158 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.16■□□□□ 0.34
Hmgb1P63158 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.15■□□□□ 0.34
Hmgb1P63158 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hmgb1P63158 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Hmgb1P63158 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Gm44454-201ENSMUST00000198541 138 ntBASIC17.15■□□□□ 0.34
Hmgb1P63158 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.15■□□□□ 0.34
Hmgb1P63158 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Gm9172-201ENSMUST00000212092 954 ntBASIC17.15■□□□□ 0.34
Hmgb1P63158 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.15■□□□□ 0.34
Hmgb1P63158 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.15■□□□□ 0.34
Hmgb1P63158 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmgb1P63158 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Hmgb1P63158 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hmgb1P63158 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hmgb1P63158 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hmgb1P63158 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Hmgb1P63158 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgb1P63158 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgb1P63158 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.14■□□□□ 0.33
Hmgb1P63158 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hmgb1P63158 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgb1P63158 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgb1P63158 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgb1P63158 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Hmgb1P63158 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgb1P63158 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Hmgb1P63158 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgb1P63158 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgb1P63158 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgb1P63158 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgb1P63158 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Hmgb1P63158 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgb1P63158 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.14■□□□□ 0.33
Hmgb1P63158 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmgb1P63158 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgb1P63158 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgb1P63158 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgb1P63158 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgb1P63158 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.13■□□□□ 0.33
Hmgb1P63158 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgb1P63158 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgb1P63158 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgb1P63158 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgb1P63158 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.13■□□□□ 0.33
Hmgb1P63158 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm8825-201ENSMUST00000182565 998 ntBASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm4518-201ENSMUST00000182638 718 ntBASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.13■□□□□ 0.33
Hmgb1P63158 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms