Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.3■□□□□ 0.04
Lhx1P63006 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.3■□□□□ 0.04
Lhx1P63006 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lhx1P63006 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.3■□□□□ 0.04
Lhx1P63006 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Lhx1P63006 Gm45167-201ENSMUST00000208007 322 ntBASIC15.3■□□□□ 0.04
Lhx1P63006 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.29■□□□□ 0.04
Lhx1P63006 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Lhx1P63006 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Lhx1P63006 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Lhx1P63006 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.29■□□□□ 0.04
Lhx1P63006 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.29■□□□□ 0.04
Lhx1P63006 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.29■□□□□ 0.04
Lhx1P63006 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.29■□□□□ 0.04
Lhx1P63006 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.29■□□□□ 0.04
Lhx1P63006 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.29■□□□□ 0.04
Lhx1P63006 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.29■□□□□ 0.04
Lhx1P63006 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.29■□□□□ 0.04
Lhx1P63006 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Lhx1P63006 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx1P63006 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lhx1P63006 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.28■□□□□ 0.04
Lhx1P63006 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 Gm27525-201ENSMUST00000184465 107 ntBASIC15.28■□□□□ 0.04
Lhx1P63006 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.28■□□□□ 0.04
Lhx1P63006 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.28■□□□□ 0.04
Lhx1P63006 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.28■□□□□ 0.04
Lhx1P63006 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.28■□□□□ 0.04
Lhx1P63006 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx1P63006 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Lhx1P63006 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Lhx1P63006 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.27■□□□□ 0.04
Lhx1P63006 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx1P63006 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms