Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Gabra1P62812 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.18□□□□□ -0.3
Gabra1P62812 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gabra1P62812 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.17□□□□□ -0.3
Gabra1P62812 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gabra1P62812 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.17□□□□□ -0.3
Gabra1P62812 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.17□□□□□ -0.3
Gabra1P62812 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gabra1P62812 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.17□□□□□ -0.3
Gabra1P62812 Gm15378-201ENSMUST00000121894 207 ntBASIC13.17□□□□□ -0.3
Gabra1P62812 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Gabra1P62812 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.17□□□□□ -0.3
Gabra1P62812 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.17□□□□□ -0.3
Gabra1P62812 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.17□□□□□ -0.3
Gabra1P62812 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Efs-202ENSMUST00000227037 2540 ntBASIC13.17□□□□□ -0.3
Gabra1P62812 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.17□□□□□ -0.3
Gabra1P62812 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.17□□□□□ -0.3
Gabra1P62812 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gabra1P62812 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.16□□□□□ -0.3
Gabra1P62812 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gabra1P62812 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.16□□□□□ -0.3
Gabra1P62812 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.16□□□□□ -0.3
Gabra1P62812 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Gm18115-201ENSMUST00000221209 621 ntBASIC13.16□□□□□ -0.3
Gabra1P62812 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.16□□□□□ -0.3
Gabra1P62812 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gabra1P62812 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.16□□□□□ -0.3
Gabra1P62812 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.16□□□□□ -0.3
Gabra1P62812 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gabra1P62812 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gabra1P62812 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gabra1P62812 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gabra1P62812 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gabra1P62812 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Gabra1P62812 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.15□□□□□ -0.3
Gabra1P62812 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.15□□□□□ -0.3
Gabra1P62812 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gabra1P62812 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Gabra1P62812 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Gabra1P62812 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Gabra1P62812 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gabra1P62812 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms