Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.23■□□□□ 0.03
Cdh5P55284 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdh5P55284 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.23■□□□□ 0.03
Cdh5P55284 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cdh5P55284 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.23■□□□□ 0.03
Cdh5P55284 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cdh5P55284 Olfr129-201ENSMUST00000122318 993 ntBASIC15.23■□□□□ 0.03
Cdh5P55284 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.23■□□□□ 0.03
Cdh5P55284 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Gm18669-201ENSMUST00000216049 778 ntBASIC15.23■□□□□ 0.03
Cdh5P55284 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Cdh5P55284 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Cdh5P55284 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.23■□□□□ 0.03
Cdh5P55284 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh5P55284 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cdh5P55284 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.22■□□□□ 0.03
Cdh5P55284 Gm28033-201ENSMUST00000184224 96 ntBASIC15.22■□□□□ 0.03
Cdh5P55284 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.22■□□□□ 0.03
Cdh5P55284 Gm29707-201ENSMUST00000196325 491 ntBASIC15.22■□□□□ 0.03
Cdh5P55284 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Cdh5P55284 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdh5P55284 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cdh5P55284 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Sybu-209ENSMUST00000228639 4113 ntBASIC15.22■□□□□ 0.03
Cdh5P55284 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdh5P55284 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh5P55284 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Cdh5P55284 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh5P55284 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Cdh5P55284 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh5P55284 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh5P55284 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
Cdh5P55284 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh5P55284 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.21■□□□□ 0.03
Cdh5P55284 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh5P55284 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Cdh5P55284 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh5P55284 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.21■□□□□ 0.03
Cdh5P55284 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.21■□□□□ 0.03
Cdh5P55284 Gm15794-201ENSMUST00000120182 631 ntBASIC15.21■□□□□ 0.03
Cdh5P55284 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh5P55284 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.21■□□□□ 0.03
Cdh5P55284 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh5P55284 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh5P55284 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh5P55284 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdh5P55284 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh5P55284 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh5P55284 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh5P55284 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdh5P55284 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh5P55284 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Cdh5P55284 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh5P55284 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh5P55284 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.21■□□□□ 0.02
Cdh5P55284 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh5P55284 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh5P55284 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh5P55284 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdh5P55284 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh5P55284 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms