Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.95□□□□□ -0.02
Cdkn2bP55271 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.95□□□□□ -0.02
Cdkn2bP55271 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cdkn2bP55271 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cdkn2bP55271 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Gm10013-201ENSMUST00000106074 672 ntBASIC14.94□□□□□ -0.02
Cdkn2bP55271 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.94□□□□□ -0.02
Cdkn2bP55271 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.94□□□□□ -0.02
Cdkn2bP55271 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdkn2bP55271 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdkn2bP55271 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.92□□□□□ -0.02
Cdkn2bP55271 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdkn2bP55271 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms