Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh6P54276 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh6P54276 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Msh6P54276 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh6P54276 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh6P54276 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh6P54276 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh6P54276 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh6P54276 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Msh6P54276 Gm14722-201ENSMUST00000118943 689 ntBASIC19.68■□□□□ 0.74
Msh6P54276 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.68■□□□□ 0.74
Msh6P54276 Gm43125-201ENSMUST00000201724 730 ntBASIC19.68■□□□□ 0.74
Msh6P54276 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Msh6P54276 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh6P54276 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Msh6P54276 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Msh6P54276 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Msh6P54276 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh6P54276 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Msh6P54276 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh6P54276 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.67■□□□□ 0.74
Msh6P54276 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh6P54276 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh6P54276 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh6P54276 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Msh6P54276 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Msh6P54276 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh6P54276 Rprl2-201ENSMUST00000157150 290 ntBASIC19.67■□□□□ 0.74
Msh6P54276 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh6P54276 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh6P54276 Gm8318-201ENSMUST00000182954 872 ntBASIC19.67■□□□□ 0.74
Msh6P54276 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.67■□□□□ 0.74
Msh6P54276 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh6P54276 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh6P54276 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh6P54276 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.67■□□□□ 0.74
Msh6P54276 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh6P54276 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Msh6P54276 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh6P54276 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.66■□□□□ 0.74
Msh6P54276 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh6P54276 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh6P54276 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh6P54276 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh6P54276 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh6P54276 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Msh6P54276 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.66■□□□□ 0.74
Msh6P54276 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.66■□□□□ 0.74
Msh6P54276 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.66■□□□□ 0.74
Msh6P54276 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh6P54276 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Msh6P54276 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh6P54276 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh6P54276 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh6P54276 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh6P54276 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh6P54276 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh6P54276 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh6P54276 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh6P54276 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Msh6P54276 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.65■□□□□ 0.74
Msh6P54276 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.65■□□□□ 0.74
Msh6P54276 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.65■□□□□ 0.74
Msh6P54276 Gm18246-201ENSMUST00000221023 728 ntBASIC19.65■□□□□ 0.74
Msh6P54276 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh6P54276 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.65■□□□□ 0.74
Msh6P54276 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Msh6P54276 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh6P54276 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Msh6P54276 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh6P54276 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh6P54276 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Msh6P54276 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Msh6P54276 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Msh6P54276 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Msh6P54276 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh6P54276 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Msh6P54276 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Msh6P54276 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19.64■□□□□ 0.73
Msh6P54276 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Msh6P54276 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Msh6P54276 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.64■□□□□ 0.73
Msh6P54276 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh6P54276 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Msh6P54276 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh6P54276 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Msh6P54276 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh6P54276 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh6P54276 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh6P54276 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh6P54276 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh6P54276 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Msh6P54276 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh6P54276 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh6P54276 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh6P54276 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh6P54276 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh6P54276 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh6P54276 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.63■□□□□ 0.73
Msh6P54276 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms