Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nek1P51954 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nek1P51954 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nek1P51954 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nek1P51954 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nek1P51954 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nek1P51954 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nek1P51954 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nek1P51954 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nek1P51954 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nek1P51954 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nek1P51954 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Nek1P51954 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nek1P51954 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nek1P51954 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Nek1P51954 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.38■□□□□ 0.37
Nek1P51954 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nek1P51954 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nek1P51954 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nek1P51954 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nek1P51954 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nek1P51954 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nek1P51954 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.38■□□□□ 0.37
Nek1P51954 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nek1P51954 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nek1P51954 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nek1P51954 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nek1P51954 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nek1P51954 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nek1P51954 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nek1P51954 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nek1P51954 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nek1P51954 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nek1P51954 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
Nek1P51954 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nek1P51954 Gm12895-201ENSMUST00000122214 226 ntBASIC17.37■□□□□ 0.37
Nek1P51954 Gm11452-201ENSMUST00000122376 690 ntBASIC17.37■□□□□ 0.37
Nek1P51954 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.37■□□□□ 0.37
Nek1P51954 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.37■□□□□ 0.37
Nek1P51954 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nek1P51954 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nek1P51954 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nek1P51954 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nek1P51954 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nek1P51954 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nek1P51954 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nek1P51954 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nek1P51954 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nek1P51954 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nek1P51954 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nek1P51954 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nek1P51954 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nek1P51954 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Nek1P51954 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.36■□□□□ 0.37
Nek1P51954 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Nek1P51954 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nek1P51954 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nek1P51954 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.36■□□□□ 0.37
Nek1P51954 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.36■□□□□ 0.37
Nek1P51954 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nek1P51954 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Nek1P51954 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nek1P51954 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.36■□□□□ 0.37
Nek1P51954 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Nek1P51954 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.35■□□□□ 0.37
Nek1P51954 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.35■□□□□ 0.37
Nek1P51954 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek1P51954 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nek1P51954 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms